[update] update eis decoder code

.gitignore

@@ -1,5 +1,7 @@
 .DS_Store
 *.cpython-37.opt-2.pyc
+*.cpython-39-arm-linux-gnueabihf.so
+*.
 *.pyc
 */__pycache__
 /.vscode

python/biopro/controller.py

@@ -1578,10 +1578,13 @@ class ControlAPI(metaclass=Router):
         raise NotImplementedError()
     
     def run_project(self, project) -> bool:
-        print('create_project', project)
-        self._project_manager.create(project)
-        return False
+        raise NotImplementedError()
 
+    def get_running_project(self) -> bool:
+        raise NotImplementedError()
+    
+    def stop_project(self, project) -> bool:
+        raise NotImplementedError()
 
 # noinspection PyAbstractClass
 class ControlClient(SocketClient, ControlAPI, metaclass=SocketClientMacro(ControlAPI)):

python/biopro/devlib/data.py

@@ -881,12 +881,17 @@ class I4V4Z4T4DataDecoder(RecDataDecoder):
     def decode(self, data: bytes) -> Optional[RecordingData]:
         if len(data) < 18:
             return None
-
+        voltage = 0
         mem_cnt = data[1]
         time_stamp: float = struct.unpack('<I', data[4:8])[0]  # unit: ms 0x18030000
         current = struct.unpack('<i', data[8:12])[0]  # unit: nA
-        voltage = struct.unpack('<i', data[12:16])[0]  # unit: uV
+        ch2 = struct.unpack('<i', data[12:16])[0]  # unit: uV
         impedance = struct.unpack('<i', data[16:20])[0]  # unit: mOm
+        if self._mode == 16:
+            voltage = impedance - ch2
+        else:
+            voltage = ch2
+
         cycle_number = struct.unpack('<H', data[20:22])[0]
         finish_mode_falg = data[22]
         battery = struct.unpack('<i', data[23:27])[0]
@@ -945,18 +950,18 @@ class I4V4Z4T4DataDecoder(RecDataDecoder):
         ret.append_data(1, voltage)
         ret.append_data(2, impedance)
         ret.append_data(3, cycle_number)
-        ret.append_data(4, battery)
-        ret.append_data(5, elite_notify_times)
-        ret.append_data(6, mem_cnt)
+        # ret.append_data(4, battery)
+        # ret.append_data(5, elite_notify_times)
+        # ret.append_data(6, mem_cnt)
 
-        # memoryboard information
-        ret.append_data(7, ram_num)
-        ret.append_data(8, broken_flag)
-        try:
-            ret.append_data(9, mem_wrong_information)
-            # print('append_data success, mem_wrong_information:', mem_wrong_information, hex(mem_wrong_information))
-        except:
-            print('append_data fail, mem_wrong_information:', mem_wrong_information, hex(mem_wrong_information))
+        # # memoryboard information
+        # ret.append_data(7, ram_num)
+        # ret.append_data(8, broken_flag)
+        # try:
+        #     ret.append_data(9, mem_wrong_information)
+        #     # print('append_data success, mem_wrong_information:', mem_wrong_information, hex(mem_wrong_information))
+        # except:
+        #     print('append_data fail, mem_wrong_information:', mem_wrong_information, hex(mem_wrong_information))
 
 
     
@@ -1396,39 +1401,33 @@ class EISZeroOneDataDecoder(RecDataDecoder):
             hsrtia_a.append(struct.unpack('>i', cali_coeff[index+1:index+5])[0]/1e8)
             hsrtia_b.append(struct.unpack('>i', cali_coeff[index+5:index+9])[0]/1e8)
             hsrtia_c.append(struct.unpack('>i', cali_coeff[index+9:index+13])[0]/1e4)
-            hsrtia_d.append(struct.unpack('>B', cali_coeff[index+13:index+14])[0])
 
             #Lv[1] 20k
             index = 80
             hsrtia_a.append(struct.unpack('>i', cali_coeff[index+1:index+5])[0]/1e8)
             hsrtia_b.append(struct.unpack('>i', cali_coeff[index+5:index+9])[0]/1e8)
             hsrtia_c.append(struct.unpack('>i', cali_coeff[index+9:index+13])[0]/1e4)
-            hsrtia_d.append(struct.unpack('>B', cali_coeff[index+13:index+14])[0])
 
             #Lv[2] 5k
             index = 100
             hsrtia_a.append(struct.unpack('>i', cali_coeff[index+1:index+5])[0]/1e8)
             hsrtia_b.append(struct.unpack('>i', cali_coeff[index+5:index+9])[0]/1e8)
             hsrtia_c.append(struct.unpack('>i', cali_coeff[index+9:index+13])[0]/1e4)
-            hsrtia_d.append(struct.unpack('>B', cali_coeff[index+13:index+14])[0])
 
             #Lv[3] 200R
             index = 120
             hsrtia_a.append(struct.unpack('>i', cali_coeff[index+1:index+5])[0]/1e8)
             hsrtia_b.append(struct.unpack('>i', cali_coeff[index+5:index+9])[0]/1e8)
             hsrtia_c.append(struct.unpack('>i', cali_coeff[index+9:index+13])[0]/1e4)
-            hsrtia_d.append(struct.unpack('>B', cali_coeff[index+13:index+14])[0])
 
             # hsrtia_a.append(struct.unpack('>I', cali_coeff[index+1:index+5])[0])
             # hsrtia_b.append(struct.unpack('>I', cali_coeff[index+5:index+9])[0]/1e6)
             # hsrtia_c.append(struct.unpack('>I', cali_coeff[index+9:index+13])[0]/1e5)
-            # hsrtia_d.append(struct.unpack('>I', cali_coeff[index+13:index+17])[0]/1e6)
 
             # print('cutoff_freq', cutoff_freq)
             # print('hsrtia_a', hsrtia_a)
             # print('hsrtia_b', hsrtia_b)
             # print('hsrtia_c', hsrtia_c)
-            # print('hsrtia_d', hsrtia_d)
             # print('phase_para_a', phase_para_a)
             # print('phase_para_b', phase_para_b)
 
@@ -1585,10 +1584,10 @@ class EISZeroOneDataDecoder(RecDataDecoder):
 
         ret = RecordingData(self.device, int(time_stamp * 1000 / 2), 0)
         if (self._mode == 0):                           #EIS Mode
-            ret.append_data(3, cycle_number)
             ret.append_data(0, ch1)                     #Raw Imag  
             ret.append_data(1, ch2)                     #Raw Real
             ret.append_data(2, ch3 * 10)                #Frequency [mHz]
+            ret.append_data(3, cycle_number)
             ret.append_data(4, round(imag_after_cal))   #Z_imag [Ohm]
             ret.append_data(5, round(real_after_cal))   #Z_real [Ohm]
             ret.append_data(6, round(impedance))        #Impedance [Ohm]
@@ -1597,10 +1596,10 @@ class EISZeroOneDataDecoder(RecDataDecoder):
             ret.append_data(9, gain)                    #Gain Level
 
         else:                                           #CV Mode
-            ret.append_data(3, cycle_number)
             ret.append_data(0, ch1)                     #Iin     [nA]
             ret.append_data(1, ch2)                     #Vset    [nV]
             ret.append_data(2, ch3)                     #Vout    [nV]
+            ret.append_data(3, cycle_number)
 
         if cycle_number != self._cycle_number:
             # notify cycle_number change

python/biopro/devlib/device.py

@@ -653,15 +653,9 @@ class DeviceInstruction:
 
     VIS_CC_ZERO = 0x40
 
-    VIS_ASK = 0x30
-    """ask in virtual instruction"""
-
     VIS_STI = 0xC0
     """stimulation on virtual instruction"""
 
-    VIS_FUH = 0x90
-    """flush virtual instruction"""
-
     VIS_INT = 0x60
     """interrupt virtual instruction"""
 
@@ -750,8 +744,6 @@ class DeviceCommonInstruction:
             return '_sync(False)', '_notify(False)', 'VIS_INT'
         elif instruction == cls.CLOSE:
             return '_sync(False)', '_notify(False)', 'VIS_INT'
-        elif instruction == cls.FLUSH:
-            return 'VIS_FUH',
         elif instruction == cls.CALL:
             return 'VIS_CAL',
         elif instruction == cls.VIS_DEVICE_DETECT:

python/biopro/devlib/library.py

@@ -1012,6 +1012,10 @@ class CompletedDevice(Device):
     def device_id(self) -> int:
         return self._device_id
 
+    @property
+    def memory_board(self) -> int:
+        return self._device_id
+
     @property
     def device_name(self) -> str:
         return self._device.device_name
@@ -1274,15 +1278,20 @@ class CompletedDevice(Device):
 
     def as_json(self) -> JSON_OBJECT:
         return {
+            'id': self.device_id,
+            'name': self.device_name,
+            'status': self._status,
             'device_id':       self.device_id,
             'device_name':     self.device_name,
             'device_address':  list(self.mac_address),
             'device_status': self._status,
+            'mac_address': self.mac_address_in_str,
+            'memory_board': self.memory_board,
+            'serial_number':   self.serial_number.as_json(),
+            'version':  self.device_version,
             'battery':         self.battery,
             'parent':          self.parent,
             'recording_file_name':      self.recording_file_name,
-            'device_version':  self.device_version,
-            'serial_number':   self.serial_number.as_json(),
             'library_name':    self._library.name,
             'library_version': str(self._library.version),
             'configuration':   self.configuration.as_json(list_hide=True),

python/biopro/impl/ext_mem.py

@@ -76,6 +76,8 @@ class MultiExtMemSpiInterface(LowLevelHardwareInterface):
 
     def set_pin_mem_req(self, value: bool):
         channel = self.select
+        # if self._pin_mem_req_value[channel] == value:
+        #     print('last_req_sig[channel] == value', channel, self._pin_mem_req_value[channel], value, datetime.now())
         self.pin_mem_req.output(value)
         self._pin_mem_req_value[channel] = value
 

python/biopro/impl/selector.py

@@ -118,13 +118,13 @@ class Selector:
         self._p2.output(p[2])
 
         # if (value == 4 and self._last_sel != 6):
-        #     print('mem_sel is not use gray code, value:', value, ', last value:', self._last_sel)
+        #     print('mem_sel is not use gray code, value:', value, ', last value:', self._last_sel, datetime.now())
         # elif (value == 5 and self._last_sel != 4):
-        #     print('mem_sel is not use gray code, value:', value, ', last value:', self._last_sel)
+        #     print('mem_sel is not use gray code, value:', value, ', last value:', self._last_sel, datetime.now())
         # elif (value == 7 and self._last_sel != 5):
-        #     print('mem_sel is not use gray code, value:', value, ', last value:', self._last_sel)
+        #     print('mem_sel is not use gray code, value:', value, ', last value:', self._last_sel, datetime.now())
         # elif (value == 6 and self._last_sel != 7):
-        #     print('mem_sel is not use gray code, value:', value, ', last value:', self._last_sel)
+        #     print('mem_sel is not use gray code, value:', value, ', last value:', self._last_sel, datetime.now())
             
         self._last_sel = value
 

python/biopro/project/project.py

@@ -29,16 +29,18 @@ class Project(threading.Thread):
     self._end_time = None
 
     self._id = None
-    self._uuid = uuid4()
+    self._uuid = str(uuid4())
     self._name = None
     self._desc = None
     self._device = None
     self._complete_device = []
-    self._status = None
+    self._status = 0
 
     self._instruction_set = Instruction()
     self._stop_flag  = False
 
+    self._task_manager = None
+
     self.setup_project(project)
     self.setup_device(self._device)
   
@@ -49,6 +51,8 @@ class Project(threading.Thread):
 
       if key == 'task':
         self._task_manager = TaskManager(project['task'])
+      elif key == 'uuid':
+        pass
       else:
         setattr(self, key, value)
       
@@ -107,17 +111,17 @@ class Project(threading.Thread):
   
   @property
   def task_list(self):
-    return self.task_manager.task_list
+    return self._task_manager.export_task_list
 
-  
   @property
   def mqtt_thread(self):
     return self._mqtt_thread
 
   def run(self):
+      self._status = 1
       self._start_time = time()
-
-      self.mqtt_thread.broadcast_command('project:' + self._name + ' start_at ' + datetime.now().strftime('%Y-%m-%d %H:%M:%S.%f')[:-3])
+      self.mqtt_thread.broadcast_command('project:' + self._name + ' start at ' + datetime.now().strftime('%Y-%m-%d %H:%M:%S.%f')[:-3])
+      
       while not self._stop_flag :
         # check running task first
         delay_time = 0
@@ -165,7 +169,6 @@ class Project(threading.Thread):
         
         # check project done then close project
         if self.check_project_done() == True:
-          self.mqtt_thread.broadcast_command('project:project ' + str(self._name) + ' stop at ' + datetime.now().strftime('%Y-%m-%d %H:%M:%S.%f')[:-3])
           print('project stop at', datetime.now())
           self.close()
         
@@ -176,9 +179,19 @@ class Project(threading.Thread):
     # TODO
     pass
 
-  def close(self):
+  def stop(self):
+    self._task_manager.running_task.stop()
+    self.mqtt_thread.broadcast_command('project:task ' + str(self._task_manager.running_task.name) + ' stop at ' + datetime.now().strftime('%Y-%m-%d %H:%M:%S.%f')[:-3])
+    self._status = 2
     self._end_time = time()
     self._stop_flag  = True
+    self.mqtt_thread.broadcast_command('project:project ' + str(self._name) + ' stop at ' + datetime.now().strftime('%Y-%m-%d %H:%M:%S.%f')[:-3])
+
+  def close(self):
+    self._status = 2
+    self._end_time = time()
+    self._stop_flag  = True
+    self.mqtt_thread.broadcast_command('project:project ' + str(self._name) + ' stop at ' + datetime.now().strftime('%Y-%m-%d %H:%M:%S.%f')[:-3])
 
   def check_project_done(self):
     for task in self._task_manager.task_list:
@@ -191,19 +204,21 @@ class Project(threading.Thread):
     # if no running task
     if self._task_manager.running_task == None:
       return False
-    device_list = self._task_manager.running_task.device
-    for device in device_list:
+
+    for device in self._task_manager.running_task.device:
       if self._complete_device[device].status == 1:
         return False
     return True
   
   def as_json(self):
-    return {
+    data = {
       'id': self._id,
       'name': self._name,
       'uuid': self._uuid,
       'desc': self._desc,
       'status': self._status,
       'device': self._device,
-      'task_list': self.task_list,
+      'task': self.task_list,
+      'running_task': self._task_manager.running_task.as_json()
     }
+    return data

python/biopro/project/project_manager.py

@@ -23,11 +23,17 @@ class ProjectManager():
       self._project_list[index].stop()
       del self._project_list[index]
 
-    def get(self):
-      return self._project_list
+    def get(self, project_uuid = None):
+      if project_uuid == None:
+        return self._project_list
+      else:
+        for project in self._project_list:
+          if project.uuid == project_uuid:
+            return project
 
-    def run(self, project):
+    def run_project(self, project):
       project.start()
 
-    def stop(self, project):
-      project.stop()
+    def stop_project(self, project):
+      _project = self.get(project)
+      _project.stop()

python/biopro/project/task_manager.py

@@ -28,6 +28,10 @@ class TaskManager():
     def task_list(self):
       return self._task_list
 
+    @property
+    def export_task_list(self):
+      return [d.as_json() for d in self._task_list]
+
     @property
     def prev_task(self):
       return self._prev_task

python/biopro/server/data.py

@@ -117,6 +117,9 @@ class DataServer(SocketServer, DataAPI):
         self.database_process = DataBaseProcess('data_server', self.log_verbose, self._queue_db, self._queue_ds_dict, self._queue_msg)
         self.database_process.start()
 
+        # self._no_data_total_duration = 0
+        # self._recv_memory_cost_time = 0
+
     @logging_info
     def setup(self):
         self._available_channel.clear()
@@ -666,7 +669,17 @@ class DataServer(SocketServer, DataAPI):
                 print("q size= ", self._configurations[device]._queue_rec.qsize())
 
             self._configurations[device].put_rec_queue(data)
+            # self._no_data_total_duration = 0
             ret = True
+        # else:
+        #     time_diff = time() - self._recv_memory_cost_time
+        #     self._no_data_total_duration += time_diff
+        #     if self._no_data_total_duration > 1:
+        #         print('data is None', device, datetime.now(), self._no_data_total_duration)
+        #         print("sync.get_pin_mem_req() != sync.get_pin_ram_sel()")
+        #         print("no~", sync.select, sync.get_pin_mem_req(), sync.get_pin_ram_sel(), datetime.now())
+        #         print()
+        # self._recv_memory_cost_time = time()
 
         return ret
 

python/biopro/server/main.py

@@ -1014,9 +1014,20 @@ class ControlServer(SocketServer, ControlServerAPI):
 
     @logging_info
     def run_project(self, project) -> bool:
-        project = self._project_manager.create(project)
-        self._project_manager.run(project)
-        return False
+        if project is not None:
+            project = self._project_manager.create(project)
+            self._project_manager.run_project(project)
+        return  project.as_json()
+    
+    @logging_info
+    def stop_project(self, project) -> bool:
+        if project is not None:
+            self._project_manager.stop_project(project)
+        return True
+
+    @logging_info
+    def get_running_project(self) -> bool:
+        return   self._project_manager.get()
 
     @logging_info
     def device_internal_command(self, device: int, oper: str, value: Any) -> bool:

python/biopro/server/recording.py

@@ -105,6 +105,9 @@ class RecordingProcess(Process):
         self._mem_tailer_len = 6
         self._single_data_len = self._elite_data_len + self._mem_header_len + self._mem_tailer_len
 
+        self._decoder = self.data_format()
+        self._start_time = time()
+
     def ensure_data_format(self) -> DataDecodeFormat:
         if isinstance(self._data_format, (str, bytes)):
             self._data_format = DataDecodeFormat.parse(self._data_format)
@@ -133,9 +136,9 @@ class RecordingProcess(Process):
             decoder._prev_data = self._prev_data
             decoder._prev_delta_time = self._prev_delta_time
             decoder._prev_time_stamp = self._prev_time_stamp
-        # elif isinstance(decoder, I4V4Z4T4DataDecoder):
+        elif isinstance(decoder, I4V4Z4T4DataDecoder):
             # get cycle_time from meta file
-            # decoder._mode = self._meta_file.configuration.MODE
+            decoder._mode = self._meta_file.configuration.get_parameter('MODE')
             # decoder._cycle_start_time = self._cycle_start_time
         elif isinstance(decoder, NeuliveThreeOneDataDecoder):
             # get amp_gain from meta file
@@ -151,9 +154,8 @@ class RecordingProcess(Process):
             decoder._prev_time_stamp = self._prev_time_stamp
         elif isinstance(decoder, EISZeroOneDataDecoder):
             # get amp_gain from meta file
-
-            decoder._ac_amp = self._meta_file.configuration.get_parameter('AC_AMP')
             decoder._mode = self._meta_file.configuration.get_parameter('MODE')
+            decoder._ac_amp = self._meta_file.configuration.get_parameter('AC_AMP')
             decoder._freq_start = self._meta_file.configuration.get_parameter('FREQ_START')
             decoder._freq_stop = self._meta_file.configuration.get_parameter('FREQ_STOP')
 
@@ -200,14 +202,13 @@ class RecordingProcess(Process):
                 self._isTimeOut = True
         self._timer = current_time
 
-        decoder = self.data_format()
         # print('sync_data')
         # print('data',data)
 
         # print('server/data', self._prev_delta_time,self._prev_time_stamp, self._prev_data)
 
         if data is None or len(data) == 0:
-            result = decoder.decode(b'')
+            result = self._decoder.decode(b'')
             if result is not None:
                 ret = result
 
@@ -221,7 +222,7 @@ class RecordingProcess(Process):
             for offset, section in self._foreach_data_section(data):
             # for section in self._neu_foreach_data_section(data):
 
-                result = decoder.decode(section)
+                result = self._decoder.decode(section)
                 # if self._isTimeOut:
                 #     try:
                 #         print('result: ', result.data_size)
@@ -229,9 +230,15 @@ class RecordingProcess(Process):
                 #         pass
 
                 try:
-                    if isinstance(decoder, I4V4Z4T4DataDecoder) or isinstance(decoder, EISZeroOneDataDecoder):
-                        if decoder.isFinishMode is not None and decoder.isFinishMode() == 1:
+                    time_duration = self._meta_file.configuration.get_parameter('TIME_DURATION')
+                    if time_duration and time_duration is not 0 and time() - self._start_time >= time_duration:
+                        self._queue_msg.put(['ds', self._device, 'interrupt'])
+                        return None
+
+                    if isinstance(self._decoder, I4V4Z4T4DataDecoder) or isinstance(self._decoder, EISZeroOneDataDecoder):
+                        if self._decoder.isFinishMode is not None and self._decoder.isFinishMode() == 1:
                             self._queue_msg.put(['ds', self._device, 'interrupt'])
+                            return None
                             # content = {}
                             # content['header'] = 'device_instruction/0'
                             # content['device'] = result.device
@@ -297,8 +304,8 @@ class RecordingProcess(Process):
                     self._last_cnt[7] = head_counter - 1
                 last_data_cnt = self._last_cnt[7]
 
-            # dont save to section when head or id is wrong
-            if (head != 255 or device_id != device):
+           # dont save to section when head or id is wrong
+            if (head != 255 or device_id != device or head_counter > 255 or head_counter < 0):
                 save = False
                 last_data_cnt = last_data_cnt + 1
 
@@ -349,13 +356,14 @@ class RecordingProcess(Process):
 
         if colum_total == 1:
             print('this ram data < 3 records, colum_total = ', colum_total)
-            print('raw_data[0]', raw_data[0])
-            return save
+            print('raw_data[0]', list(raw_data[0]))
+            save = True
+            # return save
 
         elif colum_total == 2:
             print('this ram data < 3 records, colum_total = ', colum_total)
-            print('raw_data[0]', raw_data[0])
-            print('raw_data[1]', raw_data[1])
+            print('raw_data[0]', list(raw_data[0]))
+            print('raw_data[1]', list(raw_data[1]))
             if (raw_data[col + 1][1] - raw_data[col][1] == 1) or (raw_data[col][1] == 255 and raw_data[col + 1][1] == 0):
                 save = True
 

python/res/devlib/json/elite_eis.devlib.json

@@ -11,9 +11,21 @@
   "constant": {
     "FREQ_MAX": 4294967296,
     "VOLT_MAX": 65536,
-    "BLE_WRITE_MAX": 255
+    "BLE_WRITE_MAX": 255,
+    "TIME_MAX": 100000
   },
   "parameters": {
+    "TIME_DURATION": {
+      "description": "Run duration",
+      "record_meta": true,
+      "initial": 0,
+      "domain": [
+        "TIME_MAX"
+      ],
+      "value": {
+        "expression": "VALUE"
+      }
+    },
     "CHANNEL": {
       "derzteription": "record channels",
       "record_meta": true,
@@ -48,9 +60,9 @@
       "description": "working mode",
       "record_meta": true,
       "value": [
-          "EIS CURVE",
-          "Cyclic Voltammetry",
-          "Dev Mode"
+        "EIS CURVE",
+        "Cyclic Voltammetry",
+        "Dev Mode"
       ]
     },
     "FREQ_START": {
@@ -58,10 +70,10 @@
       "record_meta": true,
       "initial": 13422819,
       "domain": [
-          "FREQ_MAX"
+        "FREQ_MAX"
       ],
       "value": {
-          "expression": "VALUE"
+        "expression": "VALUE"
       }
     },
     "FREQ_STOP": {
@@ -69,10 +81,10 @@
       "record_meta": true,
       "initial": 7,
       "domain": [
-          "FREQ_MAX"
+        "FREQ_MAX"
       ],
       "value": {
-          "expression": "VALUE"
+        "expression": "VALUE"
       }
     },
     "DELAY": {
@@ -91,21 +103,21 @@
       "record_meta": true,
       "initial": 8,
       "value": [
-          2,
-          4,
-          8,
-          16
+        2,
+        4,
+        8,
+        16
       ]
     },
     "DC_BIAS": {
       "description": "DC voltage bias in mV",
       "record_meta": true,
-      "initial": 15000,
+      "initial": 25000,
       "domain": [
-          35001
+        "VOLT_MAX"
       ],
       "value": {
-          "expression": "VALUE"
+        "expression": "VALUE"
       }
     },
     "AC_AMP": {
@@ -113,7 +125,7 @@
       "record_meta": true,
       "initial": 25,
       "domain": [
-          2048
+        2048
       ]
     },
     "SCALE": {
@@ -121,8 +133,8 @@
       "record_meta": true,
       "initial": 0,
       "value": [
-          0,
-          1
+        0,
+        1
       ]
     },
     "PPD": {
@@ -130,7 +142,7 @@
       "record_meta": true,
       "initial": 10,
       "domain": [
-          11
+        11
       ]
     },
     "RTIA": {
@@ -138,11 +150,11 @@
       "record_meta": true,
       "initial": 4,
       "value": [
-          0,
-          1,
-          2,
-          3,
-          4
+        0,
+        1,
+        2,
+        3,
+        4
       ]
     },
     "ADC_VALUE_I": {
@@ -154,10 +166,10 @@
       "record_meta": true,
       "initial": 10000,
       "domain": [
-          100001
+        100001
       ],
       "value": {
-          "expression": "VALUE"
+        "expression": "VALUE"
       }
     },
     "CTRL_HIGH_Z_15": {
@@ -242,9 +254,9 @@
     "BLE_WRITE": {
       "description": "send msg to elite",
       "domain": {
-          "list": [
+        "list": [
           "BLE_WRITE_MAX"
-          ]
+        ]
       },
       "initial": "[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]",
       "value": "VALUE"
@@ -254,12 +266,13 @@
       "domain": "int"
     }
   },
+  
   "instruction": {
     "start": [
       {
         "expression": "MODE",
         "when": {
-        "*": "start_data"
+          "*": "start_data"
         }
       }
     ],
@@ -430,4 +443,4 @@
       "_cdr('20X>ADC_VALUE_I')"
     ]
   }
-}
+}

python/res/devlib/json/elite_zm_15.devlib.json

@@ -9,6 +9,7 @@
     "minor_version_number": 6
   },
   "constant": {
+    "TIME_MAX": 100000,
     "VOLT_MAX": 65536,
     "Const_Current_Range": 1500001,
     "BLE_WRITE_MAX": 255
@@ -17,7 +18,7 @@
     "DPV_e_init": {
       "description": "DPV initial voltage ",
       "record_meta": true,
-      "initial":20000,
+      "initial": 20000,
       "domain": [
         50001
       ],
@@ -28,7 +29,7 @@
     "DPV_e_final": {
       "description": "DPV final voltage",
       "record_meta": true,
-      "initial":30000,
+      "initial": 30000,
       "domain": [
         50001
       ],
@@ -39,7 +40,7 @@
     "DPV_e_1": {
       "description": "DPV voltage return 1",
       "record_meta": true,
-      "initial":35000,
+      "initial": 35000,
       "domain": [
         50001
       ],
@@ -50,7 +51,7 @@
     "DPV_e_2": {
       "description": "DPV voltage return 2",
       "record_meta": true,
-      "initial":15000,
+      "initial": 15000,
       "domain": [
         50001
       ],
@@ -61,7 +62,7 @@
     "DPV_amp": {
       "description": "DPV pulse amplitude",
       "record_meta": true,
-      "initial":25125,
+      "initial": 25125,
       "domain": [
         50001
       ],
@@ -72,7 +73,7 @@
     "DPV_pul_width": {
       "description": "DPV pulse width",
       "record_meta": true,
-      "initial":50,
+      "initial": 50,
       "domain": [
         1000001
       ],
@@ -83,7 +84,7 @@
     "DPV_increment": {
       "description": "DPV increment",
       "record_meta": true,
-      "initial":25025,
+      "initial": 25025,
       "domain": [
         50001
       ],
@@ -94,7 +95,7 @@
     "DPV_step_time": {
       "description": "DPV step time = time of one period",
       "record_meta": true,
-      "initial":500,
+      "initial": 500,
       "domain": [
         1000001
       ],
@@ -105,7 +106,7 @@
     "DPV_notify_rate": {
       "description": "DPV sample rate",
       "record_meta": true,
-      "initial":1000,
+      "initial": 1000,
       "domain": [
         1001
       ],
@@ -116,7 +117,7 @@
     "DPV_curr_rec_min": {
       "description": "DPV current recording period start",
       "record_meta": true,
-      "initial":25,
+      "initial": 25,
       "domain": [
         101
       ],
@@ -127,7 +128,7 @@
     "DPV_curr_rec_max": {
       "description": "DPV current recording period end",
       "record_meta": true,
-      "initial":100,
+      "initial": 100,
       "domain": [
         101
       ],
@@ -166,7 +167,7 @@
     "V_initial_0": {
       "description": "Pulse Mode Segment Voltage 0",
       "record_meta": true,
-      "initial":50000,
+      "initial": 50000,
       "domain": [
         50001
       ],
@@ -177,7 +178,7 @@
     "V_initial_1": {
       "description": "Pulse Mode Segment Voltage 1",
       "record_meta": true,
-      "initial":25000,
+      "initial": 25000,
       "domain": [
         50001
       ],
@@ -188,7 +189,7 @@
     "V_initial_2": {
       "description": "Pulse Mode Segment Voltage 2",
       "record_meta": true,
-      "initial":25000,
+      "initial": 25000,
       "domain": [
         50001
       ],
@@ -199,7 +200,7 @@
     "V_initial_3": {
       "description": "Pulse Mode Segment Voltage 3",
       "record_meta": true,
-      "initial":25000,
+      "initial": 25000,
       "domain": [
         50001
       ],
@@ -210,7 +211,7 @@
     "t_pulse_0": {
       "description": "Pulse Mode Segment Duration 0",
       "record_meta": true,
-      "initial":750,
+      "initial": 750,
       "domain": [
         1000001
       ],
@@ -221,7 +222,7 @@
     "t_pulse_1": {
       "description": "Pulse Mode Segment Duration 1",
       "record_meta": true,
-      "initial":9250,
+      "initial": 9250,
       "domain": [
         1000001
       ],
@@ -232,7 +233,7 @@
     "t_pulse_2": {
       "description": "Pulse Mode Segment Duration 2",
       "record_meta": true,
-      "initial":1000,
+      "initial": 1000,
       "domain": [
         1000001
       ],
@@ -243,7 +244,7 @@
     "t_pulse_3": {
       "description": "Pulse Mode Segment Duration 3",
       "record_meta": true,
-      "initial":1000,
+      "initial": 1000,
       "domain": [
         1000001
       ],
@@ -254,7 +255,7 @@
     "CURR_REC_START_0": {
       "description": "Pulse Mode Current Recording Period Start",
       "record_meta": true,
-      "initial":35,
+      "initial": 35,
       "domain": [
         100
       ],
@@ -265,7 +266,7 @@
     "CURR_REC_START_1": {
       "description": "Pulse Mode Current Recording Period Start",
       "record_meta": true,
-      "initial":35,
+      "initial": 35,
       "domain": [
         100
       ],
@@ -276,7 +277,7 @@
     "CURR_REC_START_2": {
       "description": "Pulse Mode Current Recording Period Start",
       "record_meta": true,
-      "initial":35,
+      "initial": 35,
       "domain": [
         100
       ],
@@ -287,7 +288,7 @@
     "CURR_REC_START_3": {
       "description": "Pulse Mode Current Recording Period Start",
       "record_meta": true,
-      "initial":35,
+      "initial": 35,
       "domain": [
         100
       ],
@@ -298,7 +299,7 @@
     "CURR_REC_END_0": {
       "description": "Pulse Mode Current Recording Period End",
       "record_meta": true,
-      "initial":90,
+      "initial": 90,
       "domain": [
         100
       ],
@@ -309,7 +310,7 @@
     "CURR_REC_END_1": {
       "description": "Pulse Mode Current Recording Period End",
       "record_meta": true,
-      "initial":99,
+      "initial": 99,
       "domain": [
         100
       ],
@@ -320,7 +321,7 @@
     "CURR_REC_END_2": {
       "description": "Pulse Mode Current Recording Period End",
       "record_meta": true,
-      "initial":95,
+      "initial": 95,
       "domain": [
         100
       ],
@@ -331,7 +332,7 @@
     "CURR_REC_END_3": {
       "description": "Pulse Mode Current Recording Period End",
       "record_meta": true,
-      "initial":95,
+      "initial": 95,
       "domain": [
         100
       ],
@@ -478,13 +479,14 @@
         "Constant Current",
         "Cyclic Voltammetry",
         "Linear Sweep Voltammetry",
-        "Chronoamperometric Graph",
+        "Chronoamperometric",
         "Cali DAC - test",
         "Cali ADC - test",
         "Dev Mode",
         "Open Circuit Potential",
         "Pulse Sensing",
-	      "Differential Pulse Voltammetry (DPV)"
+        "Differential Pulse Voltammetry (DPV)",
+        "Chronopotentiometry"
       ]
     },
     "VOLT_ORIGIN": {
@@ -644,7 +646,7 @@
     },
     "CURRNET_LIMIT_VALUE": {
       "description": "Current value Setting",
-      "initial":1500000,
+      "initial": 1500000,
       "domain": [
         "Const_Current_Range"
       ],
@@ -685,6 +687,15 @@
         "expression": "VALUE"
       }
     },
+    "CC_CP_SPEED": {
+      "description": "charge speed for CC and CP mode",
+      "initial": 1,
+      "value": [
+        "low",
+        "normal",
+        "high"
+      ]
+    },
     "ADC_LEVEL_I_15": {
       "description": "ADC level",
       "record_meta": true,
@@ -762,6 +773,17 @@
         "s",
         "ms"
       ]
+    },
+    "TIME_DURATION": {
+      "description": "Run duration",
+      "record_meta": true,
+      "initial": 0,
+      "domain": [
+        "TIME_MAX"
+      ],
+      "value": {
+        "expression": "VALUE"
+      }
     }
   },
   "instruction": {
@@ -812,7 +834,8 @@
           "7": "set_adc_gain_I",
           "8": "set_adc_gain_I",
           "9": "set_adc_gain_I",
-          "13": "set_adc_gain_I"
+          "13": "set_adc_gain_I",
+          "16": "set_adc_gain_I"
         }
       },
       {
@@ -827,7 +850,8 @@
           "7": "set_adc_gain_Vin",
           "8": "set_adc_gain_Vin",
           "9": "set_adc_gain_Vin",
-          "13": "set_adc_gain_Vin"
+          "13": "set_adc_gain_Vin",
+          "16": "set_adc_gain_Vin"
         }
       },
       {
@@ -845,7 +869,8 @@
           "9": "curve_const_vscan",
           "13": "curve_ocp",
           "14": "curve_pulse_sensing",
-          "15": "curve_dpv"
+          "15": "curve_dpv",
+          "16": "curve_cp"
         }
       },
       {
@@ -1043,6 +1068,7 @@
         "vb": "Const_Current_value",
         "vc": "VOLTSTOP_MAX",
         "vd": "VOLTSTOP_MIN",
+        "ve": "CC_CP_SPEED",
         "pa": "ADC_LEVEL_I_15",
         "pb": "ADC_LEVEL_V_IN_15",
         "pc": "DAC_LEVEL_V_OUT_15",
@@ -1054,7 +1080,31 @@
         "B>va;4B>vb;2B>vc;2B>vd;",
         "4b>pa;4b>pb;",
         "4b>pc;4b>pd;",
-        "2B>pe"
+        "2B>pe;",
+        "4b>0b0001;4b>ve"
+      ]
+    },
+    "curve_cp": {
+      "type": "RIS",
+      "parameter": {
+        "va": "Charge",
+        "vb": "Const_Current_value",
+        "vc": "VOLTSTOP_MAX",
+        "vd": "VOLTSTOP_MIN",
+        "ve": "CC_CP_SPEED",
+        "pa": "ADC_LEVEL_I_15",
+        "pb": "ADC_LEVEL_V_IN_15",
+        "pc": "DAC_LEVEL_V_OUT_15",
+        "pd": "CTRL_HIGH_Z_15",
+        "pe": "SAMPLE_RATE"
+      },
+      "data": [
+        "X07;",
+        "B>va;4B>vb;2B>vc;2B>vd;",
+        "4b>pa;4b>pb;",
+        "4b>pc;4b>pd;",
+        "2B>pe;",
+        "4b>0b0000;4b>ve"
       ]
     },
     "curve_cv3": {
@@ -1313,9 +1363,7 @@
         "2B>va;4B>vb;1B>vc;1B>vd;1B>ve"
       ]
     },
-
-
-    "curve_dpv":[
+    "curve_dpv": [
       {
         "expression": "DPV_mode",
         "when": {
@@ -1388,9 +1436,6 @@
         "4b>pc;4b>pd"
       ]
     },
-
-
-
     "dpv_advanced_mode": [
       "dpv_advanced_mode_ins_1",
       "dpv_advanced_mode_ins_2",
@@ -1484,8 +1529,6 @@
     "dpv_engineering_mode_advanced": [
       "dpv_advanced_mode"
     ],
-
-
     "VIS_CC_ZERO": [
       "_data_format('I4V4Z4T4')",
       "_disable_cache(False)",
@@ -1526,6 +1569,4 @@
       ]
     }
   }
-}
-
-
+}

run-clean-loggers.sh

@@ -0,0 +1,3 @@
+#!/bin/bash
+
+ find /home/pi -maxdepth 1 -type f -iname '*.out' -mtime +30 -delete