[update] update eis decoder code

python/biopro/devlib/data.py

@@ -1401,39 +1401,33 @@ class EISZeroOneDataDecoder(RecDataDecoder):
             hsrtia_a.append(struct.unpack('>i', cali_coeff[index+1:index+5])[0]/1e8)
             hsrtia_b.append(struct.unpack('>i', cali_coeff[index+5:index+9])[0]/1e8)
             hsrtia_c.append(struct.unpack('>i', cali_coeff[index+9:index+13])[0]/1e4)
-            hsrtia_d.append(struct.unpack('>B', cali_coeff[index+13:index+14])[0])
 
             #Lv[1] 20k
             index = 80
             hsrtia_a.append(struct.unpack('>i', cali_coeff[index+1:index+5])[0]/1e8)
             hsrtia_b.append(struct.unpack('>i', cali_coeff[index+5:index+9])[0]/1e8)
             hsrtia_c.append(struct.unpack('>i', cali_coeff[index+9:index+13])[0]/1e4)
-            hsrtia_d.append(struct.unpack('>B', cali_coeff[index+13:index+14])[0])
 
             #Lv[2] 5k
             index = 100
             hsrtia_a.append(struct.unpack('>i', cali_coeff[index+1:index+5])[0]/1e8)
             hsrtia_b.append(struct.unpack('>i', cali_coeff[index+5:index+9])[0]/1e8)
             hsrtia_c.append(struct.unpack('>i', cali_coeff[index+9:index+13])[0]/1e4)
-            hsrtia_d.append(struct.unpack('>B', cali_coeff[index+13:index+14])[0])
 
             #Lv[3] 200R
             index = 120
             hsrtia_a.append(struct.unpack('>i', cali_coeff[index+1:index+5])[0]/1e8)
             hsrtia_b.append(struct.unpack('>i', cali_coeff[index+5:index+9])[0]/1e8)
             hsrtia_c.append(struct.unpack('>i', cali_coeff[index+9:index+13])[0]/1e4)
-            hsrtia_d.append(struct.unpack('>B', cali_coeff[index+13:index+14])[0])
 
             # hsrtia_a.append(struct.unpack('>I', cali_coeff[index+1:index+5])[0])
             # hsrtia_b.append(struct.unpack('>I', cali_coeff[index+5:index+9])[0]/1e6)
             # hsrtia_c.append(struct.unpack('>I', cali_coeff[index+9:index+13])[0]/1e5)
-            # hsrtia_d.append(struct.unpack('>I', cali_coeff[index+13:index+17])[0]/1e6)
 
             # print('cutoff_freq', cutoff_freq)
             # print('hsrtia_a', hsrtia_a)
             # print('hsrtia_b', hsrtia_b)
             # print('hsrtia_c', hsrtia_c)
-            # print('hsrtia_d', hsrtia_d)
             # print('phase_para_a', phase_para_a)
             # print('phase_para_b', phase_para_b)
 
@@ -1590,10 +1584,10 @@ class EISZeroOneDataDecoder(RecDataDecoder):
 
         ret = RecordingData(self.device, int(time_stamp * 1000 / 2), 0)
         if (self._mode == 0):                           #EIS Mode
-            ret.append_data(3, cycle_number)
             ret.append_data(0, ch1)                     #Raw Imag  
             ret.append_data(1, ch2)                     #Raw Real
             ret.append_data(2, ch3 * 10)                #Frequency [mHz]
+            ret.append_data(3, cycle_number)
             ret.append_data(4, round(imag_after_cal))   #Z_imag [Ohm]
             ret.append_data(5, round(real_after_cal))   #Z_real [Ohm]
             ret.append_data(6, round(impedance))        #Impedance [Ohm]
@@ -1602,10 +1596,10 @@ class EISZeroOneDataDecoder(RecDataDecoder):
             ret.append_data(9, gain)                    #Gain Level
 
         else:                                           #CV Mode
-            ret.append_data(3, cycle_number)
             ret.append_data(0, ch1)                     #Iin     [nA]
             ret.append_data(1, ch2)                     #Vset    [nV]
             ret.append_data(2, ch3)                     #Vout    [nV]
+            ret.append_data(3, cycle_number)
 
         if cycle_number != self._cycle_number:
             # notify cycle_number change

python/biopro/devlib/device.py

@@ -653,15 +653,9 @@ class DeviceInstruction:
 
     VIS_CC_ZERO = 0x40
 
-    VIS_ASK = 0x30
-    """ask in virtual instruction"""
-
     VIS_STI = 0xC0
     """stimulation on virtual instruction"""
 
-    VIS_FUH = 0x90
-    """flush virtual instruction"""
-
     VIS_INT = 0x60
     """interrupt virtual instruction"""
 
@@ -750,8 +744,6 @@ class DeviceCommonInstruction:
             return '_sync(False)', '_notify(False)', 'VIS_INT'
         elif instruction == cls.CLOSE:
             return '_sync(False)', '_notify(False)', 'VIS_INT'
-        elif instruction == cls.FLUSH:
-            return 'VIS_FUH',
         elif instruction == cls.CALL:
             return 'VIS_CAL',
         elif instruction == cls.VIS_DEVICE_DETECT:

python/biopro/devlib/library.py

@@ -1012,6 +1012,10 @@ class CompletedDevice(Device):
     def device_id(self) -> int:
         return self._device_id
 
+    @property
+    def memory_board(self) -> int:
+        return self._device_id
+
     @property
     def device_name(self) -> str:
         return self._device.device_name
@@ -1274,15 +1278,20 @@ class CompletedDevice(Device):
 
     def as_json(self) -> JSON_OBJECT:
         return {
+            'id': self.device_id,
+            'name': self.device_name,
+            'status': self._status,
             'device_id':       self.device_id,
             'device_name':     self.device_name,
             'device_address':  list(self.mac_address),
             'device_status': self._status,
+            'mac_address': self.mac_address_in_str,
+            'memory_board': self.memory_board,
+            'serial_number':   self.serial_number.as_json(),
+            'version':  self.device_version,
             'battery':         self.battery,
             'parent':          self.parent,
             'recording_file_name':      self.recording_file_name,
-            'device_version':  self.device_version,
-            'serial_number':   self.serial_number.as_json(),
             'library_name':    self._library.name,
             'library_version': str(self._library.version),
             'configuration':   self.configuration.as_json(list_hide=True),

python/biopro/impl/ext_mem.py

@@ -76,8 +76,8 @@ class MultiExtMemSpiInterface(LowLevelHardwareInterface):
 
     def set_pin_mem_req(self, value: bool):
         channel = self.select
-        if self._pin_mem_req_value[channel] == value:
-            print('last_req_sig[channel] == value', channel, self._pin_mem_req_value[channel], value, datetime.now())
+        # if self._pin_mem_req_value[channel] == value:
+        #     print('last_req_sig[channel] == value', channel, self._pin_mem_req_value[channel], value, datetime.now())
         self.pin_mem_req.output(value)
         self._pin_mem_req_value[channel] = value
 

python/biopro/server/data.py

@@ -117,8 +117,8 @@ class DataServer(SocketServer, DataAPI):
         self.database_process = DataBaseProcess('data_server', self.log_verbose, self._queue_db, self._queue_ds_dict, self._queue_msg)
         self.database_process.start()
 
-        self._no_data_total_duration = 0
-        self._recv_memory_cost_time = 0
+        # self._no_data_total_duration = 0
+        # self._recv_memory_cost_time = 0
 
     @logging_info
     def setup(self):
@@ -669,17 +669,17 @@ class DataServer(SocketServer, DataAPI):
                 print("q size= ", self._configurations[device]._queue_rec.qsize())
 
             self._configurations[device].put_rec_queue(data)
-            self._no_data_total_duration = 0
+            # self._no_data_total_duration = 0
             ret = True
-        else:
-            time_diff = time() - self._recv_memory_cost_time
-            self._no_data_total_duration += time_diff
-            if self._no_data_total_duration > 1:
-                print('data is None', device, datetime.now(), self._no_data_total_duration)
-                print("sync.get_pin_mem_req() != sync.get_pin_ram_sel()")
-                print("no~", sync.select, sync.get_pin_mem_req(), sync.get_pin_ram_sel(), datetime.now())
-                print()
-        self._recv_memory_cost_time = time()
+        # else:
+        #     time_diff = time() - self._recv_memory_cost_time
+        #     self._no_data_total_duration += time_diff
+        #     if self._no_data_total_duration > 1:
+        #         print('data is None', device, datetime.now(), self._no_data_total_duration)
+        #         print("sync.get_pin_mem_req() != sync.get_pin_ram_sel()")
+        #         print("no~", sync.select, sync.get_pin_mem_req(), sync.get_pin_ram_sel(), datetime.now())
+        #         print()
+        # self._recv_memory_cost_time = time()
 
         return ret